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PerlPrimer - Designs primers for standard, bisulphite, and real-time PCR, and sequencing

'PerlPrimer' designs primers for standard PCR, bisulphite PCR, real-time PCR (QPCR), and sequencing by automating and simplifying the process of primer design. Current features include calculation of possible primer-dimers, retrieval of genomic or CDNA sequences from Ensembl, the ability to BLAST search primers using the NCBI server, ORF, and CpG island detection algorithms, the ability to add cloning sequences to primers, automatically adjusted to be in-frame, and QPCR primer design without manual intron-exon boundary entry.

Obtaining

Web pagehttp://perlprimer.sourceforge.net
Source tarball http://prdownloads.sourceforge.net/perlprimer/perlprimer-1.1.4.tar.bz2?download
Source informationhttp://sourceforge.net/project/showfiles.php?group_id=93181
Version 1.1.4 (stable) released on 2004-06-21
Licensed under The GNU General Public License, Version 2 or later.
This is not a GNU package.

Documentation
User tutorial available in HTML format from http://perlprimer.sourceforge.net/tutorial.html
Support contacts

Help List<owenjm@users.sourceforge.net>
Developer List<owenjm@users.sourceforge.net>
Bug List<owenjm@users.sourceforge.net>

Project contacts

Maintainers
Developers

Related information

InterfacesX Window System
Source languagesPerl
Use requirementsPerl, Perl/Tk, libwww-perl 5.76 or later

Entry information

License verified byJanet Casey <jcasey@gnu.org> on 2004-06-21
Entry compiled byJanet Casey <jcasey@gnu.org>

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